Current Members

Melissa Duhaime

Melissa Duhaime

Principle Investigator   |   Pronouns: she/they     view CV view CV

Associate Professor, University of Michigan
Postdoc, Sullivan Lab, University of Arizona
PhD, Max Planck Instit. for Mar. Microbiology, 2010, with distinction
MSc, Max Planck Institute for Marine Microbiology, 2007
B.A., Biology - Microbiology, Cornell University, 2005

Rachel Cable

Rachel Cable

Graduate Student

Interests: Conservation; hand-picking microplastics out of the Great Lakes, one piece at a time.

Lizy

Lizy Michaelson

Lab Manager and Research Support

Interests: I am an environmental microbiologist learning to apply principles of aquatic ecosystem ecology to study plastics pollution as an ecological disturbance.

Skyler Har

Skyler Har

Graduate Student

Interests: I am interested in discovering the different ways microbes use plastic as a substrate and how ecological theory informs the processes of plastics degradation and material transformation. My research applies multi-omics techniques to characterize the composition of “Plastic Soup” and the microbes that metabolize it.

Armun Liaghat

Dr. Armun Liaghat

Postdoctoral scholar

Interests: Applying quantitative biology to explore the coevolution of microbes and viruses. In my postdoc project I am integrating multiomics data from aquatic ecosystems with mathematical models to predict microbial traits in the Southern Ocean and Lake Erie to explore how population dynamics and network interactions drive ecosystem function.

James

James Mullet

Graduate Student, Civil Env Engineering
co-advised with Krista Wigginton

Interests: My research examines the ecology of viruses in the environment and using them to improve water treatment and public health. I analyze phage-host interactions using ‘omics and PCR-based approaches, often with large computational datasets. I hope to use these interactions to improve water-based surveillance systems. Outside of research, I really enjoy public speaking, outreach, and science communication. I also enjoy hiking, drinking tea, reading, and going to concerts!

Erica

Erica Gardner

Guest Graduate Student, Chem Engineering
Lin Lab

Interests: I work at the intersection of chemical engineering, microbial ecology, and sustainability to develop biological solutions to plastic pollution. In the lab, I study polystyrene biodegradation by the gut microbiomes of insect larvae, using a combination of culturing, sequencing, and polymer analysis techniques. I am also working on using lifecycle assessment to inform development of biological plastic upcycling technologies. I love to look through microscopes, code in R, and macgyver lab devices from things lying around. Outside of lab I like to garden, do arts and crafts, and pet dogs.

Liam

Liam Estill

Undergraduate Researcher

Interests: Studying the degradation of plastics by "wild microbes" sourced from varied environmental systems.

Zoeya

Zoeya Ali

Undergraduate Researcher

Interests: In lab, I use molecular techniques to study microbial plastics degradation. Outside of lab, I love being creative and exploring biology and other interests through art (mostly painting)!

Kelly

Kelly Egusa, MSc

Researcher

Interests: I am developing a survey tool to collect the data that can help tell the story Michigan’s natural fiber and textile supply chain. In collaboration with Michigan Fibershed and Fibershed.org, I am working to identify the farmers, artisans, mills, retailers, makers, and innovators working with natural fibers and dyes. Our goal is to share insights into the strengths, gaps, and opportunities in Michigan’s bioregional fiber economy.

Eric Bastien

Dr. Eric Bastien (Ph.D. '25)

Collaborating Scientist; Bioinformatician (Locus Biosciences)

Interests: My main research focus is to transform coffee into bioinformatics tools and approaches to study virus-host infection networks (VHINs) from environmental samples. I developed Virus Infection Predictions (VIP) to resolve VHINs in silico, and I am now interested in the application of network thinking/theory to better understand viruses’ impact on their microbial communities. When I am not staring at my spaghetti code, I enjoy cooking, running, nature, and anything remotely nerdy (DnD, board games!)

AJ Wing

Dr. A.J Wing (Ph.D. '23)

Collaborating Scientist; Lecturer (Bioinformatics)

Interests: I am primarily interested in the role of phages in Great Lakes harmful algal blooms (HABs). Through omics-based techniques, I determine how phage influence the rise and demise of HABs from a community and population-level perspective. I use CRISPR-Cas system trends and host-phage gene transfer to understand infection histories and the metabolic impacts phage may have on their hosts. I carry a strong passion for scientific communication and public outreach in search of the next generation of stewards to protect our Great Lakes. When I’m not navigating the command line matrix, I’m immersed in home-improvement projects, hiking, farming, all things football, and reminiscing with friends old and new.

Morgan

Dr. Morgan Lindback (Ph.D. '24)

Collaborating Scientist; Postdoc USC

Interests: I study marine microbial ecology and evolution with a focus on viruses. I use lab, computational, and theoretical approaches to address how marine microbes influence biogeochemical cycles. I specialize in multo-omics approaches, population-level laboratory, experiments, and large metagenomic data analysis. I’m always learning and am particularly interested in gaining skills related to stable isotope probing, nanoSIMS, and thermodynamic models of infection. I enjoy sharing my science with the public, mentoring students, collaborating, and practicing open science. I also enjoy fermenting, moving in nature, reading cheesy detective novels, and spending time with other humans.



Former Lab Members

  • Max Murray, Univ Chicago PhD student
  • Dr. Jessica Choi, Dow staff scientist
  • Adi Mizrahi, undergraduate researcher
  • Isabelle Montilla, undergraduate researcher
  • Agniva Bhaumik, undergraduate researcher
  • Lute Smith, undergraduate researcher
  • Dr. Shannon Flynn, visiting professor Oakland Community College
  • Safura Syed, undergraduate researcher
  • James Riddell, PhD student Ohio State
  • Bridget Hegarty, assistant professor Case Western
  • Katie Langenfeld, PhD Duhaime Lab 2022 (joint CEE Wigginton Lab). Postdoc, UMich
  • Jaspreet Singh Saini, Postdoc at EPFL
  • Joyah Watkins, MSc Duhaime Lab Frontiers MSc grad. PhD student, Rice Univ
  • Rebecca Chandross
  • Fang Wu
  • Cecelia Batterbee, UM '20, MSc student, SEAS
  • Nathalie O'Hernandez, UM UROP
  • Arjun Puri, Washington University in St Louis '20
  • Emily Chiang, 2018 Doris Duke Conservation Scholar, U Mich
  • Jordan Gumm, Progenity
  • Molly Radosevich, UM EEB '18, UM Immunology lab
  • Rachna Pannu, SFSU graduate program, de la Torre Lab
  • Brittan Scales, postdoc at IOW Warnemuende
  • Alexi Schnur, UM '18
  • Katie Klier, UM '18
  • Payton Watt, UM '18
  • Isaac Klimasmith, 2017 Doris Duke Conservation Scholar, Wesleyan University
  • Alec Flores, 2017 Doris Duke Conservation Scholar, Santa Barbara Community College
  • Kaitie Kaitie Benedek, UM PiTE '17, Wyoming State Forestry intern
  • Aaron Adiwidjaja, UROP, UM Environmental Engineering '20
  • Yi (Sally) Qiu, UROP, UM Environmental Engineering '20
  • Andrew Wong, UROP, UM Environmental Engineering '20
  • Brendan Brendan Locke, UM Chemistry grad program coordinator
  • Kat Kat Wiles, UM History grad program coordinator
  • Kat Michelle Berry
  • Kat Greg Boehm, Senior Educator, California Science Center
  • Kat Paulina Devlin, MSc student Univ Michigan
  • Kat Shubhum Sidhar
  • Vinnie Vinnie Gupta, University of Michigan
  • Melissa Melissa Freeland, University of Michigan
  • Sarah Sarah Halperin, grad student UCSB, Bren School Env Sci Man
  • Emma Emma Borjigin-Wang, Harvard University
  • Nicole Nicole Dear, MPH, CDC fellow
  • Gabriel Gabriel Vargas Asensio, PhD Univ of Chicago
  • Cody Cody Sheik, faculty Univ of Minnesota-Duluth

Opportunities to Join

Inquire with Professor Duhaime if you are interested in joining the lab.

Interested graduate students should be in touch and apply to the Department of Ecology and Evolutionary Biology.

Are you an interested undergraduate?   Please address the following in your inquiry email:

  • Share a CV, which includes (i) your research experiences and skills if you've worked in a lab previously (no worries if you haven't yet, this is the time and the place to do it), (ii) relevant coursework you have taken, (iii) your graduation year and major.
  • Time frame you are looking for a position in our lab: how soon would you like to start and for how long/how many semesters do you anticipate involvement with research in the Duhaime Lab?
  • Please share your future academic plans, remaining undergraduate time, upon graduation and beyond. What is your vision is currently for where you see yourself going? What skills do you hope to acquire with us that will help you get there?
  • Why you feel joining our research group is a good fit for your academic or scientific interests.